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Publications

Categories

  • research 12
  • dynamical systems 8
  • systems biology 1
  • collective behaviour 2
  • machine learning 6
  • computational neuroscience 5
  • geometry 8
  • generative modelling 4

Diffusion Processes on Implicit Manifolds

Kawasaki-Borruat, V., Grotehans, C., Vandergheynst, P., Gosztolai, A.
arXiv (2026)

Riemannian Metric Matching for Scalable Geometric Modelling of Distributions

Bamberger, J., Gosztolai, A., Vandergheynst, P., Bronstein, M., Jones, J.
ICLR 2026 Workshop GRaM (oral) (2026)

Carré du champ flow matching: better quality-generalisation tradeoff in generative models

Bamberger, J., Jones, J., Duncan, D., Bronstein, M., Vandergheynst, P., Gosztolai, A.
ICLR (2026)
[code]

A universal dynamic routing architecture governs the flow of human cortical activity

Vinao-Carl, M., Peach, R. L., Gosztolai, A., David, M. C. B., Mallas, E. J., Kurtin, D., Alania, K., Jaramillo, V., Violante, I. R., Sharp, D. J., Grossman, N.
bioRxiv (2025)

MARBLE: Interpretable representations of neural dynamics using geometric deep learning

Gosztolai, A., Peach, R. L., Arnaudon, A., Barahona, M., Vandergheynst, P.
Nature Methods (2025)
[code] [blog post]

Implicit Gaussian process representation of vector fields over arbitrary latent manifolds

Peach, R. L., Vinao-Varl, M., Grossman, N., David, M., Mallas, E., Sharp, D., Malhotra, P. A., Vandergheynst, P., Gosztolai, A.
ICLR (2024)
[code]

Connecting the dots in ethology: applying network theory to understand neural and animal collectives

Gosztolai, A., Ramdya, P.
Current Opinion in Neurobiology (2022)

LiftPose3D, a deep learning-based approach for transforming two-dimensional to three-dimensional poses in laboratory animals

Gosztolai, A., Günel, S., Lobato-Ríos, V., Abrate, M. P., Morales, D., Rhodin, H., Fua, P., Ramdya, P.
Nature Methods (2021)
[code] [video summary] [blog post]

Unfolding the multiscale structure of networks with dynamical Ollivier-Ricci curvature

Gosztolai, A., Arnaudon, A.
Nature Communications (2021)
[code] [blog post]

Cellular memory enhances bacterial chemotactic navigation in rugged environments

Gosztolai, A., Barahona, M.
Communications Physics (2020)
[code] [blog post]

Collective search with finite perception: transient dynamics and search efficiency

Gosztolai, A., Carrillo, J. A., Barahona, M.
Frontiers in Physics (2019)
[code] [blog post]

GlnK facilitates the dynamic regulation of bacterial nitrogen assimilation

Gosztolai, A., Schumacher, J., Behrends, V., Bundy, J. G., Heydenreich, F., Bennett, M. H., Buck, M., Barahona, M.
Biophysical Journal (2017)
[code]